When Bible says "Mother of Jesus", especially in the Book of John, the first thing that comes into our mind is Mother Mary, that's because we are familiar with other Gospel books which talks about Christ birth and mother Mary, but in those days Gospel books are written independently and used as separate copies and not as a whole Bible, so those who read the Book of John alone, will not know much about Mary or Joseph, for them "Mother of Jesus" means our Heavenly Father, when we understand this truth, the Bible would revel the unconditional love of our Heavenly Father, lets see them in below topics.
Chapter 1: Introduction
Chapter 2: Real mother of Moses
Chapter 3: Mother of Jesus in the Book of John
Chapter 4: You shall see heaven open
Chapter 5: The wedding at Cana
Chapter 6: Why did Christ called His Mother "Women"?
Chapter 7: Who stood near by cross as Mother of Jesus?
Chapter 8: Behold your Mother
Chapter 9: Donkey and the foal of a donkey
Chapter 10: Who is Simon of Cyrene?
Chapter 11: Sun was darkened
Chapter 12: Woman behold your Son
Chapter 13: Other Mary
Chapter 14: He who is not against us
Chapter 15: There is a Little Boy here
Chapter 16: Joseph called Barsabas who was surnamed Justus